Review



44k salmonid oligonucleotide microarray platform  (Agilent technologies)


Bioz Verified Symbol Agilent technologies is a verified supplier
Bioz Manufacturer Symbol Agilent technologies manufactures this product  
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 90
      Buy from Supplier

    Structured Review

    Agilent technologies 44k salmonid oligonucleotide microarray platform
    Overview of the field trial and the <t>microarray</t> experimental design. (A) Abiotic and biotic stressors potentially contributing to gill damage of farmed Atlantic salmon. (B) Common reference design microarray experiment. Arrows represent microarrays with the numbers of biological replicates shown next to the arrows. The base of the arrow shows the Cy3-labeled sample (i.e., common reference pool), and the arrowhead shows the Cy5-labeled sample (i.e., experimental sample). This figure was constructed using BioRender ( https://biorender.com/ ).
    44k Salmonid Oligonucleotide Microarray Platform, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/44k salmonid oligonucleotide microarray platform/product/Agilent technologies
    Average 90 stars, based on 1 article reviews
    44k salmonid oligonucleotide microarray platform - by Bioz Stars, 2026-04
    90/100 stars

    Images

    1) Product Images from "Gill and Liver Transcript Expression Changes Associated With Gill Damage in Atlantic Salmon ( Salmo salar )"

    Article Title: Gill and Liver Transcript Expression Changes Associated With Gill Damage in Atlantic Salmon ( Salmo salar )

    Journal: Frontiers in Immunology

    doi: 10.3389/fimmu.2022.806484

    Overview of the field trial and the microarray experimental design. (A) Abiotic and biotic stressors potentially contributing to gill damage of farmed Atlantic salmon. (B) Common reference design microarray experiment. Arrows represent microarrays with the numbers of biological replicates shown next to the arrows. The base of the arrow shows the Cy3-labeled sample (i.e., common reference pool), and the arrowhead shows the Cy5-labeled sample (i.e., experimental sample). This figure was constructed using BioRender ( https://biorender.com/ ).
    Figure Legend Snippet: Overview of the field trial and the microarray experimental design. (A) Abiotic and biotic stressors potentially contributing to gill damage of farmed Atlantic salmon. (B) Common reference design microarray experiment. Arrows represent microarrays with the numbers of biological replicates shown next to the arrows. The base of the arrow shows the Cy3-labeled sample (i.e., common reference pool), and the arrowhead shows the Cy5-labeled sample (i.e., experimental sample). This figure was constructed using BioRender ( https://biorender.com/ ).

    Techniques Used: Microarray, Labeling, Construct

    Primers used in the gill either in the preliminary qPCR or the microarray validation experiment, including comparison between microarray Rank Products and qPCR fold-change results for Atlantic salmon transcripts responsive in moderately damaged gill.
    Figure Legend Snippet: Primers used in the gill either in the preliminary qPCR or the microarray validation experiment, including comparison between microarray Rank Products and qPCR fold-change results for Atlantic salmon transcripts responsive in moderately damaged gill.

    Techniques Used: Microarray, Sequencing, Amplification, Binding Assay

    Bar plot of gill transcripts related to gill remodeling and wound healing (panel A–U ). On the lower right side, Panel (V) shows a scatterplot of log 2 fold-change from Rank Products microarray data vs . qPCR log 2 fold-change. Different letters indicate a significant difference between groups using one-way ANOVA. Asterisk (*) shows significance (p< 0.05) between GS0 and GS2 using t-test. Gene symbols followed by a dagger (†) are associated with p-values between 0.05 and 0.10 using either t-test (GS0 vs GS2; i.e., mmp19 ) or one-way ANOVA (i.e., tnnt2 ).
    Figure Legend Snippet: Bar plot of gill transcripts related to gill remodeling and wound healing (panel A–U ). On the lower right side, Panel (V) shows a scatterplot of log 2 fold-change from Rank Products microarray data vs . qPCR log 2 fold-change. Different letters indicate a significant difference between groups using one-way ANOVA. Asterisk (*) shows significance (p< 0.05) between GS0 and GS2 using t-test. Gene symbols followed by a dagger (†) are associated with p-values between 0.05 and 0.10 using either t-test (GS0 vs GS2; i.e., mmp19 ) or one-way ANOVA (i.e., tnnt2 ).

    Techniques Used: Microarray

    Results of principal component analysis (PCA) plotted on two dimensions (Panel A ) for the gill differentially expressed microarray log 2 ratio (Cy5/Cy3). PC1 explained 50.72%, PC2 explained 25.49%, and PC3 explained 7.46% of the variability. Panel (B) Bar-plot of the percentage of the explained variance for each PC (dimension). Panel (C) PCA plotted on three dimensions for the gill differentially expressed microarray log 2 ratio (Cy5/Cy3) data.
    Figure Legend Snippet: Results of principal component analysis (PCA) plotted on two dimensions (Panel A ) for the gill differentially expressed microarray log 2 ratio (Cy5/Cy3). PC1 explained 50.72%, PC2 explained 25.49%, and PC3 explained 7.46% of the variability. Panel (B) Bar-plot of the percentage of the explained variance for each PC (dimension). Panel (C) PCA plotted on three dimensions for the gill differentially expressed microarray log 2 ratio (Cy5/Cy3) data.

    Techniques Used: Microarray



    Similar Products

    44k salmonid oligonucleotide microarray platform  (Agilent technologies)
    90
    Agilent technologies 44k salmonid oligonucleotide microarray platform
    Overview of the field trial and the <t>microarray</t> experimental design. (A) Abiotic and biotic stressors potentially contributing to gill damage of farmed Atlantic salmon. (B) Common reference design microarray experiment. Arrows represent microarrays with the numbers of biological replicates shown next to the arrows. The base of the arrow shows the Cy3-labeled sample (i.e., common reference pool), and the arrowhead shows the Cy5-labeled sample (i.e., experimental sample). This figure was constructed using BioRender ( https://biorender.com/ ).
    44k Salmonid Oligonucleotide Microarray Platform, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/44k salmonid oligonucleotide microarray platform/product/Agilent technologies
    Average 90 stars, based on 1 article reviews
    44k salmonid oligonucleotide microarray platform - by Bioz Stars, 2026-04
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Overview of the field trial and the microarray experimental design. (A) Abiotic and biotic stressors potentially contributing to gill damage of farmed Atlantic salmon. (B) Common reference design microarray experiment. Arrows represent microarrays with the numbers of biological replicates shown next to the arrows. The base of the arrow shows the Cy3-labeled sample (i.e., common reference pool), and the arrowhead shows the Cy5-labeled sample (i.e., experimental sample). This figure was constructed using BioRender ( https://biorender.com/ ).

    Journal: Frontiers in Immunology

    Article Title: Gill and Liver Transcript Expression Changes Associated With Gill Damage in Atlantic Salmon ( Salmo salar )

    doi: 10.3389/fimmu.2022.806484

    Figure Lengend Snippet: Overview of the field trial and the microarray experimental design. (A) Abiotic and biotic stressors potentially contributing to gill damage of farmed Atlantic salmon. (B) Common reference design microarray experiment. Arrows represent microarrays with the numbers of biological replicates shown next to the arrows. The base of the arrow shows the Cy3-labeled sample (i.e., common reference pool), and the arrowhead shows the Cy5-labeled sample (i.e., experimental sample). This figure was constructed using BioRender ( https://biorender.com/ ).

    Article Snippet: The consortium for Genomic Research on All Salmonids Project (cGRASP)-designed Agilent 44K salmonid oligonucleotide microarray platform ( ) was utilized in the current transcriptome profiling.

    Techniques: Microarray, Labeling, Construct

    Primers used in the gill either in the preliminary qPCR or the microarray validation experiment, including comparison between microarray Rank Products and qPCR fold-change results for Atlantic salmon transcripts responsive in moderately damaged gill.

    Journal: Frontiers in Immunology

    Article Title: Gill and Liver Transcript Expression Changes Associated With Gill Damage in Atlantic Salmon ( Salmo salar )

    doi: 10.3389/fimmu.2022.806484

    Figure Lengend Snippet: Primers used in the gill either in the preliminary qPCR or the microarray validation experiment, including comparison between microarray Rank Products and qPCR fold-change results for Atlantic salmon transcripts responsive in moderately damaged gill.

    Article Snippet: The consortium for Genomic Research on All Salmonids Project (cGRASP)-designed Agilent 44K salmonid oligonucleotide microarray platform ( ) was utilized in the current transcriptome profiling.

    Techniques: Microarray, Sequencing, Amplification, Binding Assay

    Bar plot of gill transcripts related to gill remodeling and wound healing (panel A–U ). On the lower right side, Panel (V) shows a scatterplot of log 2 fold-change from Rank Products microarray data vs . qPCR log 2 fold-change. Different letters indicate a significant difference between groups using one-way ANOVA. Asterisk (*) shows significance (p< 0.05) between GS0 and GS2 using t-test. Gene symbols followed by a dagger (†) are associated with p-values between 0.05 and 0.10 using either t-test (GS0 vs GS2; i.e., mmp19 ) or one-way ANOVA (i.e., tnnt2 ).

    Journal: Frontiers in Immunology

    Article Title: Gill and Liver Transcript Expression Changes Associated With Gill Damage in Atlantic Salmon ( Salmo salar )

    doi: 10.3389/fimmu.2022.806484

    Figure Lengend Snippet: Bar plot of gill transcripts related to gill remodeling and wound healing (panel A–U ). On the lower right side, Panel (V) shows a scatterplot of log 2 fold-change from Rank Products microarray data vs . qPCR log 2 fold-change. Different letters indicate a significant difference between groups using one-way ANOVA. Asterisk (*) shows significance (p< 0.05) between GS0 and GS2 using t-test. Gene symbols followed by a dagger (†) are associated with p-values between 0.05 and 0.10 using either t-test (GS0 vs GS2; i.e., mmp19 ) or one-way ANOVA (i.e., tnnt2 ).

    Article Snippet: The consortium for Genomic Research on All Salmonids Project (cGRASP)-designed Agilent 44K salmonid oligonucleotide microarray platform ( ) was utilized in the current transcriptome profiling.

    Techniques: Microarray

    Results of principal component analysis (PCA) plotted on two dimensions (Panel A ) for the gill differentially expressed microarray log 2 ratio (Cy5/Cy3). PC1 explained 50.72%, PC2 explained 25.49%, and PC3 explained 7.46% of the variability. Panel (B) Bar-plot of the percentage of the explained variance for each PC (dimension). Panel (C) PCA plotted on three dimensions for the gill differentially expressed microarray log 2 ratio (Cy5/Cy3) data.

    Journal: Frontiers in Immunology

    Article Title: Gill and Liver Transcript Expression Changes Associated With Gill Damage in Atlantic Salmon ( Salmo salar )

    doi: 10.3389/fimmu.2022.806484

    Figure Lengend Snippet: Results of principal component analysis (PCA) plotted on two dimensions (Panel A ) for the gill differentially expressed microarray log 2 ratio (Cy5/Cy3). PC1 explained 50.72%, PC2 explained 25.49%, and PC3 explained 7.46% of the variability. Panel (B) Bar-plot of the percentage of the explained variance for each PC (dimension). Panel (C) PCA plotted on three dimensions for the gill differentially expressed microarray log 2 ratio (Cy5/Cy3) data.

    Article Snippet: The consortium for Genomic Research on All Salmonids Project (cGRASP)-designed Agilent 44K salmonid oligonucleotide microarray platform ( ) was utilized in the current transcriptome profiling.

    Techniques: Microarray